STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57170.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
EFK58529.1
Putative gliding motility-associated lipoprotein GldD.
  
     0.749
erpA
Iron-sulfur cluster assembly accessory protein; COG: COG0316; Pfam: PF01521; InterPro: IPR000361; Belongs to the HesB/IscA family.
       0.698
EFK59054.1
Putative gliding motility-associated lipoprotein GldB.
  
     0.692
EFK59038.1
Putative gliding motility-associated lipoprotein GldJ; Pfam: PF03781; InterPro: IPR005532.
  
     0.681
EFK58847.1
Outer membrane insertion signal domain protein.
  
     0.657
EFK55829.1
Bacteroidetes-specific putative membrane protein.
  
     0.655
EFK58364.1
Bacteroidetes-specific putative membrane protein.
  
     0.654
EFK57917.1
Hypothetical protein.
  
     0.642
EFK55837.1
Bacteroidetes-specific putative membrane protein.
  
     0.641
EFK58038.1
Bacteroidetes-specific putative membrane protein.
  
     0.629
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.