STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaBMannitol dehydrogenase domain protein; COG: COG0246; Pfam: PF01232,PF08125; InterPro: IPR016040. (503 aa)    
Predicted Functional Partners:
EFK57197.1
D-galactarate dehydratase/altronate hydrolase domain protein; COG: COG2721; Pfam: PF04295; InterPro: IPR007392.
 
 0.995
uxaC
Glucuronate isomerase; COG: COG1904; Pfam: PF02614; InterPro: IPR003766.
 
 
 0.986
EFK56727.1
SAF domain protein; COG: COG2721; Pfam: PF08666,PF04295; InterPro: IPR007392.
 
 0.979
uxaC-2
Glucuronate isomerase; COG: COG1904; Pfam: PF02614; InterPro: IPR003766.
 
 
 0.937
EFK57200.1
Glycosyl hydrolase, family 88; COG: COG4225; Pfam: PF07470; InterPro: IPR012341.
 
    0.883
EFK57201.1
Polygalacturonase (pectinase); COG: COG5434; Pfam: PF00295; InterPro: IPR012334; Belongs to the glycosyl hydrolase 28 family.
 
     0.854
EFK57195.1
Kinase, PfkB family; COG: COG0524; Pfam: PF00294; InterPro: IPR011611.
 
  
 0.847
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.805
pelA
Pectate lyase; InterPro: IPR012669.
       0.787
EFK57194.1
KDPG and KHG aldolase; COG: COG0800; Pfam: PF01081; InterPro: IPR013785.
 
   
 0.778
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.