STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57276.1Hypothetical protein. (40 aa)    
Predicted Functional Partners:
EFK57275.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
       0.648
EFK57277.1
Hypothetical protein.
       0.636
EFK57274.1
Redoxin family protein; Pfam: PF08534; InterPro: IPR012335.
       0.460
EFK57278.1
Transcriptional regulator, BlaI/MecI/CopY family; Pfam: PF03965; InterPro: IPR005650.
       0.408
EFK57279.1
Peptidase, M56 family; Pfam: PF05569.
       0.408
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.