STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57294.1Hypothetical protein; Pfam: PF06439; InterPro: IPR010496. (275 aa)    
Predicted Functional Partners:
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
 0.843
EFK55867.1
Tat pathway signal sequence domain protein; Pfam: PF01408; InterPro: IPR016040.
 
     0.838
EFK58168.1
Oxidoreductase, NAD-binding domain protein; Pfam: PF01408; InterPro: IPR016040.
 
     0.742
EFK56818.1
Tat pathway signal sequence domain protein; COG: COG0673; Pfam: PF01408; InterPro: IPR016040.
 
     0.644
EFK57179.1
Tat pathway signal sequence domain protein; COG: COG1082; Pfam: PF01261; InterPro: IPR013022.
 
     0.588
EFK56114.1
Tat pathway signal sequence domain protein; COG: COG0673; Pfam: PF01408; InterPro: IPR016040.
 
     0.587
EFK56214.1
SusD family protein; Pfam: PF07980; InterPro: IPR012944.
  
     0.575
EFK56213.1
TonB-linked outer membrane protein, SusC/RagA family; Pfam: PF07660,PF07715,PF00593; InterPro: IPR000531.
  
    0.560
EFK56115.1
Tat pathway signal sequence domain protein; Pfam: PF01408; InterPro: IPR016040.
 
     0.557
EFK59695.1
Hypothetical protein; Pfam: PF06439; InterPro: IPR010496.
  
     0.544
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.