STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57395.1Transporter, major facilitator family protein; COG: COG2814; Pfam: PF07690; InterPro: IPR011701. (390 aa)    
Predicted Functional Partners:
EFK57396.1
Hydrolase, alpha/beta domain protein; COG: COG0657; Pfam: PF07859; InterPro: IPR013094.
       0.727
EFK57397.1
Transcriptional regulator, HxlR family; COG: COG1733; Pfam: PF01638; InterPro: IPR002577.
       0.490
serA2
HAD phosphoserine phosphatase-like hydrolase, family IB; COG: COG0111.
    
  0.412
EFK57398.1
Cyclic nucleotide-binding domain protein; Pfam: PF00027; InterPro: IPR014710.
       0.412
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.