STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57396.1Hydrolase, alpha/beta domain protein; COG: COG0657; Pfam: PF07859; InterPro: IPR013094. (310 aa)    
Predicted Functional Partners:
nuoF
NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
    
  0.943
nuoE
NADH-quinone oxidoreductase, E subunit; COG: COG1905; Pfam: PF01257; InterPro: IPR002023.
    
  0.939
lysS2
2Fe-2S iron-sulfur cluster binding domain protein; COG: COG1034; Pfam: PF00111.
    
 0.928
EFK59683.1
Hypothetical protein.
    
   0.847
EFK57395.1
Transporter, major facilitator family protein; COG: COG2814; Pfam: PF07690; InterPro: IPR011701.
       0.727
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.711
EFK58548.1
Hypothetical protein.
   
 0.711
ndhI
4Fe-4S binding domain protein; COG: COG1143; Pfam: PF00037.
    
   0.670
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
    
   0.670
fdx
4Fe-4S binding domain protein; Pfam: PF00037.
    
   0.670
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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