STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57462.1Tat pathway signal sequence domain protein; Pfam: PF00657; InterPro: IPR013831. (254 aa)    
Predicted Functional Partners:
yesX
FG-GAP repeat protein; Pfam: PF01839.
  
 0.626
EFK58459.1
Hypothetical protein.
  
 0.569
EFK57205.1
Hypothetical protein; COG: COG0657; Pfam: PF07859; InterPro: IPR013094.
    
 0.501
EFK59070.1
Glycosyl hydrolase family 2, sugar binding domain protein; Pfam: PF02837.
   
 0.500
EFK58368.1
Hypothetical protein.
   
 0.500
EFK58034.1
Hypothetical protein.
   
 0.500
EFK58123.1
Hypothetical protein.
   
 0.500
EFK57604.1
Hypothetical protein.
   
 0.500
EFK59402.1
Ricin-type beta-trefoil lectin domain protein; COG: COG5434; Pfam: PF00295,PF00652; InterPro: IPR012334; Belongs to the glycosyl hydrolase 28 family.
  
 
  0.491
EFK57201.1
Polygalacturonase (pectinase); COG: COG5434; Pfam: PF00295; InterPro: IPR012334; Belongs to the glycosyl hydrolase 28 family.
  
 
  0.482
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.