STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57492.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EFK57493.1
Hypothetical protein.
       0.773
EFK57494.1
PRTRC system protein E.
       0.752
EFK57491.1
Hypothetical protein.
       0.718
EFK57495.1
PRTRC system protein C.
       0.698
EFK57496.1
Hypothetical protein.
       0.654
EFK57490.1
Hypothetical protein.
       0.641
EFK57497.1
PRTRC system protein B.
       0.640
EFK57498.1
PRTRC system ThiF family protein; Pfam: PF00899.
       0.640
EFK57489.1
Phage/plasmid-related protein TIGR03299.
       0.510
EFK57487.1
Hypothetical protein.
       0.426
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.