STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACopper-resistance protein, CopA family; COG: COG2132; Pfam: PF07732,PF00394,PF07731; InterPro: IPR008972. (771 aa)    
Predicted Functional Partners:
EFK57570.1
Hypothetical protein.
 
 
 0.896
EFK57573.1
Hypothetical protein.
 
     0.886
EFK57576.1
Hypothetical protein.
 
     0.827
EFK57574.1
Hypothetical protein; Pfam: PF03713.
 
  
 0.812
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.794
EFK57540.1
Hypothetical protein.
 
 
 0.790
EFK57575.1
Hypothetical protein.
 
   
 0.787
EFK58742.1
Hypothetical protein.
 
 
 0.783
copB
Copper-exporting ATPase; COG: COG2217; Pfam: PF00122,PF00702; InterPro: IPR001757.
 
  
 0.701
EFK57542.1
Hypothetical protein.
 
     0.689
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.