STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57686.1Efflux transporter, RND family, MFP subunit; COG: COG0845; Pfam: PF00529; InterPro: IPR006143; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (382 aa)    
Predicted Functional Partners:
EFK57687.1
Putative ATP synthase F0, A subunit; COG: COG0841; Pfam: PF00873; InterPro: IPR004764; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.974
EFK57688.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; COG: COG1538; Pfam: PF02321; InterPro: IPR010131.
 
  0.970
czcA-4
Heavy metal efflux pump, CzcA family; COG: COG3696; Pfam: PF00873,PF02321; InterPro: IPR004763; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.930
EFK57954.1
Putative ATP synthase F0, A subunit; COG: COG0841; Pfam: PF00873; InterPro: IPR004764; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.916
bpeF
RND transporter, HAE1 family; COG: COG0841; Pfam: PF00873; InterPro: IPR004764; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.908
acrB
RND transporter, HAE1 family; COG: COG0841; Pfam: PF00873,PF02321; InterPro: IPR004764; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.906
bpeF2
RND transporter, HAE1 family; COG: COG0841; Pfam: PF00873; InterPro: IPR004764; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.906
EFK56462.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; Pfam: PF02321; InterPro: IPR010131.
 
  0.903
acrD
RND transporter, HAE1 family; COG: COG0841; Pfam: PF00873; InterPro: IPR004764; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  0.902
EFK57953.1
Efflux transporter, outer membrane factor lipoprotein, NodT family; COG: COG1538; Pfam: PF02321; InterPro: IPR010131.
 
  0.902
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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