STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57711.1Hypothetical protein; InterPro: IPR016040. (147 aa)    
Predicted Functional Partners:
EFK57713.1
E1-E2 ATPase; Pfam: PF00122,PF00702; InterPro: IPR001757.
  
   0.863
hemN
Coproporphyrinogen dehydrogenase; COG: COG0635; Pfam: PF04055,PF06969; InterPro: IPR004558; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.849
maeB
Putative phosphate acetyltransferase; COG: COG0281; Pfam: PF00390,PF03949,PF01515; InterPro: IPR002505.
   
 0.795
EFK58387.1
FAD linked oxidase, C-terminal domain protein; COG: COG0277; Pfam: PF01565,PF02913; InterPro: IPR004113.
   
 0.723
EFK56292.1
FAD binding domain protein; COG: COG0277; Pfam: PF01565,PF02913; InterPro: IPR004113.
   
 0.723
tktA2
Transketolase, C-terminal domain protein; COG: COG0022; Pfam: PF00676,PF02779,PF02780; InterPro: IPR001017.
  
 
 0.678
pyk
Pyruvate kinase; COG: COG0469; Pfam: PF00224,PF02887; InterPro: IPR001697; Belongs to the pyruvate kinase family.
  
 0.676
serA2
HAD phosphoserine phosphatase-like hydrolase, family IB; COG: COG0111.
 
  
 0.676
EFK59025.1
Hypothetical protein.
  
     0.666
crp
Response regulator receiver domain protein; Pfam: PF00072,PF00027,PF00325; InterPro: IPR014710.
  
  
 0.652
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.