STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57713.1E1-E2 ATPase; Pfam: PF00122,PF00702; InterPro: IPR001757. (797 aa)    
Predicted Functional Partners:
hemN
Coproporphyrinogen dehydrogenase; COG: COG0635; Pfam: PF04055,PF06969; InterPro: IPR004558; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
     0.937
ccoS
Cytochrome oxidase maturation protein, cbb3-type; Pfam: PF03597; InterPro: IPR004714.
 
  
 0.885
ccoN
Cytochrome c oxidase, cbb3-type, subunit I; COG: COG3278; Pfam: PF00115,PF02433; InterPro: IPR004677; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.880
EFK57711.1
Hypothetical protein; InterPro: IPR016040.
  
   0.863
ccoG
Cytochrome c oxidase accessory protein CcoG; COG: COG0348; Pfam: PF00037; InterPro: IPR014116.
 
  
 0.851
ccoP
Putative cytochrome c oxidase, cbb3-type, subunit III; COG: COG2010; Pfam: PF00034; InterPro: IPR009056.
 
   
 0.847
EFK58898.1
Hypothetical protein.
 
   
 0.844
EFK60095.1
Copper-exporting ATPase; COG: COG2217; Pfam: PF00403,PF00122,PF00702; InterPro: IPR001757.
  
  
0.659
actP
Copper-exporting ATPase; COG: COG2217; Pfam: PF00403,PF00122,PF00702; InterPro: IPR001757.
  
  
0.657
actP2
Copper-exporting ATPase; COG: COG2217; Pfam: PF00122,PF00702; InterPro: IPR001757.
  
  
0.654
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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