STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57823.1Peptidase, S9A/B/C family, catalytic domain protein; COG: COG1506; Pfam: PF00930,PF00326; InterPro: IPR002469. (707 aa)    
Predicted Functional Partners:
EFK57702.1
Peptidase, M28 family; COG: COG2234; Pfam: PF04389; InterPro: IPR007484.
  
    0.678
EFK57209.1
Peptidase, M28 family; COG: COG2234; Pfam: PF04389; InterPro: IPR007484.
  
    0.658
EFK60029.1
WD40-like protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.579
EFK59985.1
Peptidase, M28 family; COG: COG2234; Pfam: PF04389; InterPro: IPR007484.
 
    0.569
cinA
Competence/damage-inducible domain protein CinA; COG: COG1058; Pfam: PF00994,PF02464; InterPro: IPR008135; Belongs to the CinA family.
  
 
  0.553
cinA2
Competence/damage-inducible domain protein CinA; COG: COG1546; Pfam: PF02464; InterPro: IPR008136; Belongs to the CinA family.
  
 
  0.553
EFK59808.1
PA domain protein; COG: COG2234; Pfam: PF02225,PF04389; InterPro: IPR007484.
  
    0.522
EFK57822.1
Hypothetical protein.
       0.489
EFK56488.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.468
EFK57824.1
Hypothetical protein; 1.14.99.36.
       0.466
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.