STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57861.1Hypothetical protein. (452 aa)    
Predicted Functional Partners:
EFK57862.1
SusD family protein; Pfam: PF07980; InterPro: IPR012944.
 
     0.874
EFK57863.1
TonB-linked outer membrane protein, SusC/RagA family; Pfam: PF07715,PF00593; InterPro: IPR000531.
 
     0.804
bglX
Glycosyl hydrolase family 3 N-terminal domain protein; COG: COG1472; Pfam: PF00933,PF01915; InterPro: IPR002772; Belongs to the glycosyl hydrolase 3 family.
 
    0.764
EFK57864.1
Hypothetical protein; Pfam: PF07494,PF07495.
 
     0.667
EFK59392.1
Hypothetical protein.
  
     0.515
EFK58285.1
Endonuclease/exonuclease/phosphatase family protein; Pfam: PF03372; InterPro: IPR005135.
 
     0.430
EFK57852.1
Phospholipase/carboxylesterase; Pfam: PF02230.
 
     0.416
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.