STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK57876.1Peptidase, M28 family; Pfam: PF04389; InterPro: IPR007484. (521 aa)    
Predicted Functional Partners:
EFK56901.1
Leucine Rich Repeat protein; Pfam: PF00560.
    
  0.652
EFK57877.1
Hypothetical protein.
       0.648
EFK57875.1
Hypothetical protein.
       0.571
cls
Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
  0.559
otsB
Trehalose-phosphatase; COG: COG0380; Pfam: PF00982,PF02358; InterPro: IPR001830.
    
  0.499
EFK57209.1
Peptidase, M28 family; COG: COG2234; Pfam: PF04389; InterPro: IPR007484.
  
     0.497
EFK55894.1
Peptidase, S9A/B/C family, catalytic domain protein; COG: COG1506; Pfam: PF07676,PF00326; InterPro: IPR001375.
  
    0.465
ggt
Gamma-glutamyltransferase; COG: COG0405; Pfam: PF01019; InterPro: IPR000101.
  
  0.462
EFK55867.1
Tat pathway signal sequence domain protein; Pfam: PF01408; InterPro: IPR016040.
  
  
  0.407
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.