STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idhThiazolinyl imide reductase; COG: COG0673; Pfam: PF01408; InterPro: IPR016040. (357 aa)    
Predicted Functional Partners:
EFK57899.1
Tat pathway signal sequence domain protein; Pfam: PF01408; InterPro: IPR016040.
 
  
  0.871
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
   
 0.539
EFK56628.1
AP endonuclease, family 2; Pfam: PF01261; InterPro: IPR012307.
  
 
  0.486
EFK56818.1
Tat pathway signal sequence domain protein; COG: COG0673; Pfam: PF01408; InterPro: IPR016040.
 
     0.481
EFK57898.1
Hypothetical protein; Pfam: PF05684; InterPro: IPR008537.
       0.475
EFK55862.1
Tat pathway signal sequence domain protein; Pfam: PF01408; InterPro: IPR016040.
  
  
 
0.449
ydgJ
Oxidoreductase, NAD-binding domain protein; COG: COG0673; Pfam: PF01408,PF02894; InterPro: IPR016040.
  
  
 
0.432
EFK57901.1
Hypothetical protein; Pfam: PF07656.
       0.431
EFK58183.1
Phospholipase C, phosphocholine-specific; COG: COG3511; Pfam: PF04185,PF05506; InterPro: IPR007312.
  
     0.428
yvaA
Oxidoreductase, NAD-binding domain protein; COG: COG0673; Pfam: PF01408,PF02894; InterPro: IPR016040.
  
  
 
0.426
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.