STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK55841.1Hypothetical protein. (1206 aa)    
Predicted Functional Partners:
EFK58038.1
Bacteroidetes-specific putative membrane protein.
 
     0.642
EFK55829.1
Bacteroidetes-specific putative membrane protein.
 
     0.641
EFK58364.1
Bacteroidetes-specific putative membrane protein.
 
     0.630
EFK55837.1
Bacteroidetes-specific putative membrane protein.
 
     0.630
EFK57957.1
Conserved repeat protein; Pfam: PF01345,PF02369; InterPro: IPR001434.
  
     0.623
EFK58216.1
Hypothetical protein.
  
     0.599
queE
Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
       0.568
EFK55840.1
Hypothetical protein.
       0.568
EFK57890.1
Bacteroidetes-specific putative membrane protein.
  
     0.548
EFK56455.1
Hypothetical protein.
  
   0.546
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.