STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK55868.1Tat pathway signal sequence domain protein. (210 aa)    
Predicted Functional Partners:
EFK55866.1
GMC oxidoreductase; Pfam: PF01266.
 
 0.939
purL
Putative phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.848
EFK56118.1
GMC oxidoreductase; COG: COG2303; Pfam: PF01266.
 
 0.842
EFK58705.1
Hypothetical protein; Pfam: PF01266,PF00732.
 
 0.835
EFK58248.1
Hypothetical protein; COG: COG2303; Pfam: PF01266.
 
 0.835
EFK55867.1
Tat pathway signal sequence domain protein; Pfam: PF01408; InterPro: IPR016040.
 
 
  0.787
EFK55865.1
Nucleoside transporter; Pfam: PF03825; InterPro: IPR004740.
 
     0.760
EFK57879.1
Hypothetical protein; Pfam: PF06439; InterPro: IPR010496.
 
     0.642
EFK57179.1
Tat pathway signal sequence domain protein; COG: COG1082; Pfam: PF01261; InterPro: IPR013022.
 
     0.491
EFK57903.1
Nucleoside transporter; Pfam: PF03825; InterPro: IPR004740.
 
     0.480
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.