STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK55870.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
EFK58117.1
Gram-positive signal peptide protein, YSIRK family; Pfam: PF00578; InterPro: IPR000866.
  
     0.711
EFK57817.1
Redoxin family protein; Pfam: PF00578.
  
     0.647
EFK55869.1
Acyl-ACP thioesterase; Pfam: PF01643; InterPro: IPR002864.
 
     0.601
EFK59466.1
Hypothetical protein.
  
     0.469
EFK59811.1
Hypothetical protein.
  
     0.467
EFK57142.1
Hypothetical protein.
  
     0.447
EFK58804.1
Hypothetical protein.
  
     0.443
EFK59055.1
Hypothetical protein.
  
     0.441
EFK58123.1
Hypothetical protein.
  
     0.439
EFK58434.1
Putative protein RarD; Pfam: PF00892; InterPro: IPR000620.
  
     0.436
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.