STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sseARhodanese-like protein; COG: COG2897; Pfam: PF00581; InterPro: IPR001763. (285 aa)    
Predicted Functional Partners:
iscS
Aminotransferase, class V; COG: COG1104; Pfam: PF00266; InterPro: IPR000192.
   
 0.947
iscS2
Aminotransferase, class V; COG: COG1104; Pfam: PF00266; InterPro: IPR000192.
   
 0.947
aspC2
Aminotransferase, class I/II; COG: COG0436; Pfam: PF00155; InterPro: IPR004839.
     
 0.936
aspC
Aminotransferase, class I/II; COG: COG0436; Pfam: PF00155; InterPro: IPR004839.
     
 0.936
cysI
Nitrite/sulfite reductase ferredoxin domain protein; COG: COG0155; Pfam: PF03460,PF01077,PF05168; InterPro: IPR006067.
 
  
 0.898
atpB3
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite.
 
  
 0.885
mdeA
Putative O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 
 0.877
metY
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; COG: COG2873; Pfam: PF01053; InterPro: IPR006235.
     
 0.859
cysK2
Pyridoxal-phosphate dependent protein; COG: COG0031; Pfam: PF00291; InterPro: IPR001926.
  
 
 0.828
bar
Acetyltransferase, GNAT family; COG: COG1247; Pfam: PF00583; InterPro: IPR016181.
       0.781
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.