STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK56433.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
EFK56434.1
Hypothetical protein.
 
     0.960
EFK56431.1
OsmC-like protein; COG: COG1764; Pfam: PF02566; InterPro: IPR003718.
       0.655
EFK56432.1
Hypothetical protein; Pfam: PF08818.
       0.655
yahJ
Tat pathway signal sequence domain protein; COG: COG0402; Pfam: PF07969.
  
  
  0.526
punA
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
 0.505
mqnB
Futalosine nucleosidase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
     
 0.489
bioA
Adenosylmethionine-8-amino-7-oxononanoate transaminase; COG: COG0161; Pfam: PF00202; InterPro: IPR005815; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.454
EFK58504.1
Hypothetical protein.
  
     0.427
EFK56435.1
DoxX family protein; Pfam: PF07681; InterPro: IPR011637.
       0.415
EFK58503.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.