STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsAArylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917. (449 aa)    
Predicted Functional Partners:
EFK59138.1
Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532.
 
 
   0.857
arsa
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
  
  
 
0.845
EFK58653.1
BNR/Asp-box repeat protein; Pfam: PF02012.
  
 
  0.836
aslA
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
  
  
 
0.629
EFK58345.1
Putative gliding motility-associated lipoprotein GldK; COG: COG1262; Pfam: PF03781; InterPro: IPR005532.
 
 
   0.623
EFK55861.1
Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532.
 
 
   0.594
EFK56466.1
Glycosyl hydrolase family 3 C-terminal domain protein; COG: COG1472; Pfam: PF00933,PF01915; InterPro: IPR002772; Belongs to the glycosyl hydrolase 3 family.
       0.572
EFK59038.1
Putative gliding motility-associated lipoprotein GldJ; Pfam: PF03781; InterPro: IPR005532.
 
 
   0.555
atsA
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
 
  
 
0.528
EFK56468.1
Hypothetical protein.
       0.511
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.