STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK56499.1Peptidase M16 inactive domain protein; COG: COG0612; Pfam: PF00675,PF05193; InterPro: IPR011237. (417 aa)    
Predicted Functional Partners:
EFK56500.1
Peptidase M16 inactive domain protein; Pfam: PF05193; InterPro: IPR011237.
     0.996
EFK59683.1
Hypothetical protein.
   
 0.982
nuoF
NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
   
 
 0.935
lysS2
2Fe-2S iron-sulfur cluster binding domain protein; COG: COG1034; Pfam: PF00111.
   
 
 0.928
nuoE
NADH-quinone oxidoreductase, E subunit; COG: COG1905; Pfam: PF01257; InterPro: IPR002023.
   
 
 0.922
EFK59339.1
Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.890
coxN
Cytochrome C and quinol oxidase polypeptide I; COG: COG0843; Pfam: PF00115; InterPro: IPR000883; Belongs to the heme-copper respiratory oxidase family.
    
 
 0.888
EFK59345.1
Cytochrome C; Pfam: PF00034.
   
 0.846
nuoC-2
NADH dehydrogenase, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
  
 
 0.790
EFK55963.1
Deoxynucleoside kinase; COG: COG1428; Pfam: PF01712; InterPro: IPR002624.
   
 
 0.781
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.