STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK56629.1Tat pathway signal sequence domain protein; Pfam: PF07394; InterPro: IPR010869. (497 aa)    
Predicted Functional Partners:
EFK56630.1
Hypothetical protein; Pfam: PF07583,PF03422,PF07587; InterPro: IPR011444.
 
     0.964
EFK56627.1
Hypothetical protein.
 
     0.950
EFK56628.1
AP endonuclease, family 2; Pfam: PF01261; InterPro: IPR012307.
 
     0.927
EFK57739.1
Hypothetical protein.
  
     0.687
EFK57719.1
Hypothetical protein; Pfam: PF06439.
  
     0.655
EFK59695.1
Hypothetical protein; Pfam: PF06439; InterPro: IPR010496.
  
     0.629
EFK58653.1
BNR/Asp-box repeat protein; Pfam: PF02012.
  
     0.620
EFK58230.1
Hypothetical protein; Pfam: PF06439; InterPro: IPR010496.
  
     0.516
EFK57899.1
Tat pathway signal sequence domain protein; Pfam: PF01408; InterPro: IPR016040.
  
     0.513
EFK56713.1
Hypothetical protein.
  
     0.494
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.