STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK56666.1Hypothetical protein. (470 aa)    
Predicted Functional Partners:
EFK56662.1
Hypothetical protein; Pfam: PF03415; InterPro: IPR005077.
 
     0.883
EFK56665.1
TonB-dependent receptor; Pfam: PF00593; InterPro: IPR000531.
 
     0.876
EFK56667.1
DNA/RNA non-specific endonuclease; COG: COG1864; Pfam: PF01223; InterPro: IPR001604.
 
   
0.784
EFK56663.1
Hypothetical protein.
 
   
 0.780
EFK58972.1
Hypothetical protein.
  
     0.772
EFK55850.1
Hypothetical protein.
  
     0.772
EFK57816.1
Hypothetical protein.
  
     0.762
EFK58313.1
Hypothetical protein.
  
     0.752
EFK56444.1
Hypothetical protein.
  
     0.735
EFK58314.1
Hypothetical protein.
  
     0.718
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.