STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adh2Putative phosphonate catabolism associated alcohol dehydrogenase; COG: COG1063; Pfam: PF08240,PF00107; InterPro: IPR002085. (359 aa)    
Predicted Functional Partners:
phnB
Transporter, major facilitator family protein; Pfam: PF07690; InterPro: IPR011701.
 
     0.879
adh
GroES-like protein; COG: COG1064; Pfam: PF08240,PF00107; InterPro: IPR002085.
 
 0.728
EFK57017.1
Putative phosphonatase-like hydrolase; Pfam: PF00702; InterPro: IPR005834.
 
     0.706
tktA2
Transketolase, C-terminal domain protein; COG: COG0022; Pfam: PF00676,PF02779,PF02780; InterPro: IPR001017.
  
 
 0.686
cryZ
NAD(P)H quinone oxidoreductase, PIG3 family; COG: COG0604; Pfam: PF08240,PF00107; InterPro: IPR014189.
 
  
 0.628
EFK57018.1
Tat pathway signal sequence domain protein; Pfam: PF00149; InterPro: IPR004843.
 
     0.615
adhA
GroES-like protein; COG: COG1064; Pfam: PF08240,PF00107; InterPro: IPR002085.
 
0.568
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.535
ispD
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
  
 
 0.522
lat
L-lysine 6-transaminase; COG: COG0160; Pfam: PF00202; InterPro: IPR005814; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.500
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.