STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amt-2Ammonium transporter; COG: COG0004; Pfam: PF00909; InterPro: IPR001905. (434 aa)    
Predicted Functional Partners:
gltB
Class II glutamine amidotransferase; COG: COG0069; Pfam: PF00310,PF04898,PF01645,PF01493; InterPro: IPR013785.
 
  
 0.785
EFK59264.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF00512,PF02518,PF00072; InterPro: IPR001789.
 
 0.646
EFK56121.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF05227,PF00672,PF00512,PF02518,PF00072; InterPro: IPR001789.
  
 0.570
EFK57082.1
Hypothetical protein.
       0.524
EFK59551.1
Response regulator receiver domain protein; Pfam: PF07494,PF07495,PF00512,PF02518,PF00072,PF00165; InterPro: IPR003594.
    
 0.512
EFK59662.1
Response regulator receiver domain protein; Pfam: PF07494,PF07495,PF00512,PF02518,PF00072,PF00165; InterPro: IPR003594.
    
 0.512
EFK58752.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG5002; Pfam: PF07494,PF07495,PF00512,PF02518,PF00072,PF00165; InterPro: IPR003594.
    
 0.512
EFK57084.1
Hypothetical protein.
     
 0.466
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.