STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK55706.1Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453. (252 aa)    
Predicted Functional Partners:
EFK57252.1
ABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593.
 
 0.999
EFK55704.1
Putative virulence factor Mce family protein; Pfam: PF02470; InterPro: IPR003399.
 
 0.999
EFK55705.1
ABC transporter, ATP-binding protein; COG: COG1127; Pfam: PF00005; InterPro: IPR003593.
 
 0.999
EFK59211.1
Hypothetical protein; Pfam: PF02470; InterPro: IPR003399.
  
 0.997
EFK59411.1
STAS domain protein; Pfam: PF01740; InterPro: IPR002645.
   
  0.978
EFK57251.1
Hypothetical protein; COG: COG0767; Pfam: PF02405; InterPro: IPR003453.
  
  
 
0.967
EFK58995.1
ABC transporter, ATP-binding protein; COG: COG1137; Pfam: PF00005; InterPro: IPR003593.
 
  
  0.593
EFK58709.1
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR001140.
 
   0.582
EFK60099.1
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR001140.
  
   0.514
EFK60100.1
ABC transporter, ATP-binding protein; COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR003593.
  
   0.514
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.