Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFK55743.1 | corA | HMPREF0766_14434 | HMPREF0766_14435 | Outer membrane protein; Pfam: PF03938; InterPro: IPR005632. | Putative magnesium and cobalt transport protein CorA; COG: COG0598; Pfam: PF01544; InterPro: IPR002523. | 0.507 |
EFK57768.1 | corA | HMPREF0766_12841 | HMPREF0766_14435 | Putative YigZ family protein; COG: COG1739; Pfam: PF01205; InterPro: IPR001498. | Putative magnesium and cobalt transport protein CorA; COG: COG0598; Pfam: PF01544; InterPro: IPR002523. | 0.404 |
EFK60160.1 | corA | HMPREF0766_10104 | HMPREF0766_14435 | Hypothetical protein; COG: COG1253; Pfam: PF01595,PF00571,PF03471; InterPro: IPR002550. | Putative magnesium and cobalt transport protein CorA; COG: COG0598; Pfam: PF01544; InterPro: IPR002523. | 0.447 |
corA | EFK55743.1 | HMPREF0766_14435 | HMPREF0766_14434 | Putative magnesium and cobalt transport protein CorA; COG: COG0598; Pfam: PF01544; InterPro: IPR002523. | Outer membrane protein; Pfam: PF03938; InterPro: IPR005632. | 0.507 |
corA | EFK57768.1 | HMPREF0766_14435 | HMPREF0766_12841 | Putative magnesium and cobalt transport protein CorA; COG: COG0598; Pfam: PF01544; InterPro: IPR002523. | Putative YigZ family protein; COG: COG1739; Pfam: PF01205; InterPro: IPR001498. | 0.404 |
corA | EFK60160.1 | HMPREF0766_14435 | HMPREF0766_10104 | Putative magnesium and cobalt transport protein CorA; COG: COG0598; Pfam: PF01544; InterPro: IPR002523. | Hypothetical protein; COG: COG1253; Pfam: PF01595,PF00571,PF03471; InterPro: IPR002550. | 0.447 |