STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK17876.1Chemotaxis protein MotB. (278 aa)    
Predicted Functional Partners:
SFK17850.1
Chemotaxis protein MotA.
 
 0.999
SFK17902.1
Chemotaxis protein MotB.
 
  
 
0.987
SFJ46870.1
Chemotaxis protein MotA.
 
 0.986
SFK43128.1
PAS domain S-box-containing protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.945
SFJ95636.1
PAS domain S-box-containing protein.
  
  
 0.944
SFK24914.1
PAS domain S-box-containing protein.
  
  
 0.944
SFJ68291.1
Chemotaxis protein MotA.
  
 0.942
SFK17928.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.942
SFJ46898.1
Flagellar motor protein MotB.
  
  
  0.934
SFK17974.1
Flagellar motor switch protein FliN/FliY.
 
  
 0.918
Your Current Organism:
Desulfomicrobium apsheronum
NCBI taxonomy Id: 52560
Other names: D. apsheronum, DSM 5918
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.