STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL22530.1Type IV pilus assembly protein PilP. (163 aa)    
Predicted Functional Partners:
SFL22568.1
Type IV pilus assembly protein PilN.
 
 
 0.998
SFL22548.1
Type IV pilus assembly protein PilO.
 
 
 0.997
SFL22507.1
Type IV pilus assembly protein PilQ.
 
 
 0.994
SFL22588.1
Type IV pilus assembly protein PilM.
 
 
 0.977
SFL63170.1
Type IV pilus assembly protein PilC.
    
 
 0.823
SFL95238.1
PAAR motif-containing protein.
   
   0.747
SFL92425.1
Hypothetical protein.
   
   0.687
SFL41254.1
Type IV pilus assembly protein PilB.
    
 
 0.638
SFL42224.1
General secretion pathway protein E.
    
 
 0.638
SFL57683.1
Type IV pilus assembly protein PilB.
    
 
 0.638
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.