STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL27707.1Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family; Antitoxin component of a type II toxin-antitoxin (TA) system. (80 aa)    
Predicted Functional Partners:
SFL27691.1
Toxin-antitoxin system, toxin component, Txe/YoeB family.
 
 0.995
SFL77842.1
Toxin YoeB.
  
 0.910
SFM03618.1
mRNA interferase RelE/StbE.
 
 
 0.876
SFL29936.1
mRNA interferase RelE/StbE.
   
 0.857
SFM21900.1
RelE toxin of RelE / RelB toxin-antitoxin system.
   
 0.857
SFL35581.1
Predicted nuclease of the RNAse H fold, HicB family.
  
  
 0.722
SFM07085.1
mRNA interferase MazF.
    
 0.683
SFM19651.1
mRNA interferase HigB.
     
 0.677
SFL31291.1
mRNA-degrading endonuclease (mRNA interferase) YafQ, toxin component of the YafQ-DinJ toxin-antitoxin module.
    
 0.674
SFM00464.1
Helix-turn-helix.
     
 0.673
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.