STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL29451.1Type III secretion protein D. (488 aa)    
Predicted Functional Partners:
SFL29539.1
Type III secretion protein J.
  
  
 0.964
SFL29445.1
Type III secretion protein C.
  
  
 0.947
SFL91071.1
PAS domain S-box-containing protein.
  
 0.943
SFL70402.1
Octaheme c-type cytochrome, tetrathionate reductase family.
   
  0.941
SFL86537.1
PAS domain S-box-containing protein.
  
 
 0.940
SFL97630.1
PAS domain S-box-containing protein.
  
 
 0.935
SFM09194.1
PAS domain S-box-containing protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
 0.935
SFL29239.1
Type III secretion protein V.
  
  
 0.933
SFL35362.1
Tubulin-specific chaperone A.
  
 
 0.919
SFL71250.1
PAS domain S-box-containing protein.
  
 
 0.918
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.