Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL23089.1 | SFL23105.1 | SAMN05421830_10150 | SAMN05421830_10151 | Hypothetical protein. | Putative protease. | 0.808 |
SFL23089.1 | SFL23121.1 | SAMN05421830_10150 | SAMN05421830_10152 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0178 family. | 0.787 |
SFL23089.1 | infA | SAMN05421830_10150 | SAMN05421830_10149 | Hypothetical protein. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.539 |
SFL23105.1 | SFL23089.1 | SAMN05421830_10151 | SAMN05421830_10150 | Putative protease. | Hypothetical protein. | 0.808 |
SFL23105.1 | SFL23121.1 | SAMN05421830_10151 | SAMN05421830_10152 | Putative protease. | Hypothetical protein; Belongs to the UPF0178 family. | 0.786 |
SFL23105.1 | infA | SAMN05421830_10151 | SAMN05421830_10149 | Putative protease. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.518 |
SFL23121.1 | SFL23089.1 | SAMN05421830_10152 | SAMN05421830_10150 | Hypothetical protein; Belongs to the UPF0178 family. | Hypothetical protein. | 0.787 |
SFL23121.1 | SFL23105.1 | SAMN05421830_10152 | SAMN05421830_10151 | Hypothetical protein; Belongs to the UPF0178 family. | Putative protease. | 0.786 |
SFL23121.1 | infA | SAMN05421830_10152 | SAMN05421830_10149 | Hypothetical protein; Belongs to the UPF0178 family. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.515 |
infA | SFL23089.1 | SAMN05421830_10149 | SAMN05421830_10150 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Hypothetical protein. | 0.539 |
infA | SFL23105.1 | SAMN05421830_10149 | SAMN05421830_10151 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Putative protease. | 0.518 |
infA | SFL23121.1 | SAMN05421830_10149 | SAMN05421830_10152 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | Hypothetical protein; Belongs to the UPF0178 family. | 0.515 |