STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL46390.1Putative protease. (654 aa)    
Predicted Functional Partners:
SFL23792.1
Predicted O-methyltransferase YrrM.
  
  
 0.682
SFL64126.1
O-methyltransferase.
  
  
 0.682
SFM15650.1
Hypothetical protein.
  
     0.616
SFM15634.1
Putative zinc-or iron-chelating domain-containing protein.
  
     0.611
SFM15782.1
Hypothetical protein.
  
     0.503
SFL72805.1
Dihydrodipicolinate reductase, C-terminus.
 
 
  0.499
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
    
  0.483
SFL96685.1
Threonine synthase.
  
     0.474
SFL46351.1
Hypothetical protein.
       0.459
SFL46367.1
Response regulator receiver domain-containing protein.
       0.459
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.