STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL53483.1Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate. (552 aa)    
Predicted Functional Partners:
SFL25851.1
WD40-like Beta Propeller Repeat.
    
 0.983
SFL53464.1
Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
 
 0.980
SFM09944.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.919
SFL57749.1
Cytochrome bd terminal oxidase subunit I.
   
 0.913
SFL73807.1
Tetratricopeptide repeat-containing protein.
   
 0.911
SFL99946.1
Ribosomal protein S12 methylthiotransferase accessory factor.
   
 0.911
SFL22778.1
Tetratricopeptide repeat-containing protein.
    
 0.909
SFL29251.1
Hypothetical protein.
    
 0.909
SFL29511.1
Hypothetical protein.
    
 0.909
SFL61037.1
Tetratricopeptide repeat-containing protein.
    
 0.909
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.