STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL56880.1Sulfate permease, SulP family. (736 aa)    
Predicted Functional Partners:
SFM09793.1
DNA repair exonuclease SbcCD nuclease subunit.
  
  0.958
SFL70402.1
Octaheme c-type cytochrome, tetrathionate reductase family.
    
  0.952
SFL34394.1
3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.893
SFL73403.1
3-oxoacyl-[acyl-carrier protein] reductase.
    
 0.893
SFL84633.1
3-oxoacyl-[acyl-carrier protein] reductase.
    
 0.893
SFL88931.1
Protein of unknown function.
    
 0.893
SFM14528.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
    
 0.893
SFL64392.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.855
SFL26768.1
Hypothetical protein.
  
 
 0.831
SFL44826.1
Signal peptidase I; Belongs to the peptidase S26 family.
   
 
  0.814
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.