STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (381 aa)    
Predicted Functional Partners:
SFL61313.1
Spermidine/putrescine transport system permease protein.
 0.999
SFL61334.1
Spermidine/putrescine transport system permease protein.
 
 0.998
SFL61355.1
Spermidine/putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.996
SFL62984.1
Spermidine/putrescine transport system permease protein.
 0.980
SFL62941.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.974
SFL62299.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.970
SFL63004.1
Spermidine/putrescine transport system permease protein.
 
 
 0.968
SFM02987.1
Putative spermidine/putrescine transport system permease protein.
 
 0.948
SFL77205.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
    
  0.946
SFL66059.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.942
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.