STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL62152.1Lipopolysaccharide export system permease protein. (360 aa)    
Predicted Functional Partners:
SFL62128.1
Lipopolysaccharide export system permease protein.
0.999
SFL77205.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
  
 0.994
SFM22657.1
Lipopolysaccharide export system ATP-binding protein.
 
 
 0.991
SFM10462.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
  
 0.875
SFM10445.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
  
 0.870
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
  
 0.870
SFL24729.1
Zinc transport system permease protein.
     
 0.869
SFL27422.1
ABC-2 type transport system ATP-binding protein.
   
 
 0.858
SFL46882.1
Lipopolysaccharide transport system permease protein.
    
  0.857
SFL24706.1
Zinc transport system ATP-binding protein.
     
 0.849
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.