STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL62338.1Peptide/nickel transport system permease protein. (324 aa)    
Predicted Functional Partners:
SFL62299.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.999
SFL62320.1
Peptide/nickel transport system permease protein.
 
 0.999
SFL62280.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.998
SFL62355.1
Peptide/nickel transport system substrate-binding protein.
 0.997
SFL51069.1
Peptide/nickel transport system permease protein.
 
 0.995
SFL51108.1
Peptide/nickel transport system substrate-binding protein.
 0.990
SFL51048.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.988
SFL51030.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.984
SFL73685.1
Microcin C transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.971
SFL73739.1
Microcin C transport system substrate-binding protein.
  
 
 0.940
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.