STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL72035.1Hypothetical protein. (373 aa)    
Predicted Functional Partners:
SFL72057.1
DNA-binding transcriptional regulator, ArsR family.
     
 0.799
SFL86818.1
Small redox-active disulfide protein 2.
 
   
 0.730
SFM15335.1
Protease FtsH subunit HflK; HflC and HflK could encode or regulate a protease.
 
      0.638
SFM23864.1
AAA domain-containing protein, putative AbiEii toxin, Type IV TA system.
   
    0.497
SFL72075.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.464
SFL61733.1
ATP-dependent DNA helicase RecG.
  
    0.425
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.