STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL79011.14Fe-4S dicluster domain-containing protein. (91 aa)    
Predicted Functional Partners:
SFM09944.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.970
SFL78993.1
CO dehydrogenase/acetyl-CoA synthase delta subunit.
 
  
  0.968
SFM01597.1
NADH-quinone oxidoreductase subunit F/NAD(P)H dehydrogenase (quinone)/NADP-reducing hydrogenase subunit HndC.
 
  
 0.921
SFL64392.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.840
SFL69957.1
NADPH-dependent glutamate synthase beta chain.
    
 0.835
SFL42941.1
Fumarate reductase flavoprotein subunit.
  
 0.830
SFL45434.1
Dissimilatory adenylylsulfate reductase alpha subunit precursor.
  
 0.830
SFM01189.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.800
sucD
succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
  0.747
SFL80212.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
    
  0.721
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.