STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL88886.1Cobalamin biosynthesis protein CobT. (580 aa)    
Predicted Functional Partners:
SFL88975.1
Cobaltochelatase CobS.
 
 
 0.947
SFL89048.1
ERF superfamily protein.
 
   
 0.786
SFL61170.1
MJ0042 family finger-like domain-containing protein.
 
  
  0.647
SFL27023.1
MoxR-like ATPase.
    
 0.571
SFL88912.1
Hypothetical protein.
       0.513
SFL35742.1
VCBS repeat-containing protein.
  
     0.503
SFL88931.1
Protein of unknown function.
  
  
 0.474
SFL34899.1
cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
 0.472
SFL57181.1
Hypothetical protein.
  
     0.465
SFL29886.1
Phosphomannomutase/phosphomannomutase / phosphoglucomutase.
     
 0.440
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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