STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL87520.14-amino-4-deoxy-L-arabinose transferase. (538 aa)    
Predicted Functional Partners:
SFL44406.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.860
SFL84984.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.807
SFL47264.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.782
SFL44429.1
Uncharacterized N-terminal domain of lipid-A-disaccharide synthase.
 
     0.760
SFL87506.1
Phosphoglycerol transferase MdoB.
  
    0.679
SFL87538.1
Calcineurin-like phosphoesterase.
  
  
 0.678
SFL28248.1
Polysaccharide deacetylase.
  
 
 0.629
SFL28430.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
  
 
 0.629
SFL47362.1
Polysaccharide deacetylase.
  
 
 0.629
SFM09578.1
KDO2-lipid IV(A) lauroyltransferase.
 
  
 0.618
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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