STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL95528.1Serine/threonine protein phosphatase Stp1. (242 aa)    
Predicted Functional Partners:
SFL95543.1
Serine/threonine-protein kinase Stk1.
 
 0.989
SFL26917.1
Serine/threonine protein kinase.
 
 0.957
SFL26768.1
Hypothetical protein.
   
 0.945
SFL52989.1
16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
  
 0.920
SFL95494.1
Type VI secretion system protein ImpL.
 
 
 0.916
SFL95458.1
Type VI secretion system protein ImpJ.
 
 
 0.908
SFL23918.1
Aminomethyltransferase.
   
 0.894
SFL95375.1
Type VI secretion system protein ImpH.
 
 
 0.878
SFL95427.1
Type VI secretion system protein ImpI.
 
  
 0.871
SFL95321.1
Type VI secretion system protein ImpC.
 
 
 0.861
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.