STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM06957.1TonB-dependent Receptor Plug Domain. (832 aa)    
Predicted Functional Partners:
SFL25383.1
Cell division and transport-associated protein TolA.
  
 0.922
SFL30079.1
Protein TonB.
  
 0.922
SFL42814.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 0.922
SFL80026.1
Hypothetical protein.
     
 0.847
SFL29015.1
OmpA-OmpF porin, OOP family.
    
 0.802
SFL28505.1
Polysaccharide export outer membrane protein.
     
 0.787
SFL76379.1
Polysaccharide export outer membrane protein.
     
 0.787
SFL82364.1
Polysaccharide export outer membrane protein.
     
 0.787
SFL25402.1
Cell division and transport-associated protein TolR.
  
 
 0.775
SFL35781.1
T1SS-143 domain-containing protein/type I secretion C-terminal target domain (VC_A0849 subclass).
   
 
 0.772
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.