STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM07293.1Flavorubredoxin. (402 aa)    
Predicted Functional Partners:
SFL69741.1
Rhodanese-like domain-containing protein.
   
 0.882
SFM07326.1
Superoxide reductase.
 
  
 0.809
SFM07273.1
HEAT-like repeat-containing protein.
       0.804
SFM07253.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
       0.765
SFM07310.1
Rubredoxin.
 
  
 0.698
SFM07198.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
     
 0.688
SFL32078.1
Hemerythrin.
  
  
 0.666
SFM01670.1
Superoxide reductase.
  
  
 0.528
SFL95679.1
Rubrerythrin.
 
  
 0.435
SFM09944.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
 
  
 0.432
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.