STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM10901.1Diguanylate cyclase (GGDEF) domain-containing protein. (485 aa)    
Predicted Functional Partners:
SFL86537.1
PAS domain S-box-containing protein.
 
 0.939
SFM00774.1
HD domain-containing protein.
 
 
  0.932
SFM09194.1
PAS domain S-box-containing protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 0.923
SFL86550.1
Putative two-component system response regulator.
 
 
 
  0.919
SFL91071.1
PAS domain S-box-containing protein.
 
 0.915
SFL76285.1
PAS domain S-box-containing protein.
 0.908
SFL29029.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.904
SFL57092.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 
 
 
 0.904
SFM18834.1
PAS domain S-box-containing protein.
 
 0.904
SFL52835.1
Response regulator receiver domain-containing protein.
 
 
 0.901
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.