Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM06630.1 | SFM14472.1 | SAMN05421830_11315 | SAMN05421830_11648 | PTS system, nitrogen regulatory IIA component. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.455 |
SFM14458.1 | SFM14472.1 | SAMN05421830_11647 | SAMN05421830_11648 | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.461 |
SFM14472.1 | SFM06630.1 | SAMN05421830_11648 | SAMN05421830_11315 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | PTS system, nitrogen regulatory IIA component. | 0.455 |
SFM14472.1 | SFM14458.1 | SAMN05421830_11648 | SAMN05421830_11647 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | Amino acid/amide ABC transporter substrate-binding protein, HAAT family. | 0.461 |
SFM14472.1 | SFM22009.1 | SAMN05421830_11648 | SAMN05421830_12219 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | NTE family protein. | 0.406 |
SFM14472.1 | SFM22585.1 | SAMN05421830_11648 | SAMN05421830_1239 | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.455 |
SFM22009.1 | SFM14472.1 | SAMN05421830_12219 | SAMN05421830_11648 | NTE family protein. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.406 |
SFM22585.1 | SFM14472.1 | SAMN05421830_1239 | SAMN05421830_11648 | PTS IIA-like nitrogen-regulatory protein PtsN. | L-ascorbate metabolism protein UlaG, beta-lactamase superfamily. | 0.455 |