STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM17456.1Hypothetical protein. (329 aa)    
Predicted Functional Partners:
SFM09944.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.912
SFM01597.1
NADH-quinone oxidoreductase subunit F/NAD(P)H dehydrogenase (quinone)/NADP-reducing hydrogenase subunit HndC.
    
 0.883
SFL69957.1
NADPH-dependent glutamate synthase beta chain.
    
  0.822
SFM17495.1
NADPH-dependent FMN reductase.
 
     0.700
SFM14566.1
4Fe-4S binding domain-containing protein.
 
 
 0.620
SFM01189.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
  0.575
SFM01617.1
NADH-quinone oxidoreductase subunit E.
    
 0.528
SFM17512.1
Flavodoxin.
 
    0.528
SFM01578.1
Formate dehydrogenase alpha subunit.
  
 
 0.527
SFL43183.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit.
    
  0.523
Your Current Organism:
Desulfomicrobium norvegicum
NCBI taxonomy Id: 52561
Other names: D. norvegicum, Desulfovibrio desulfuricans (strain Norway 4), Desulfovibrio desulfuricans norway, NCIMB 8310, strain Norway 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.